Systems Biology is a merger of Systems and Control Theory with Molecular and Cell Biology.
Systems biology aims to explain how higher level properties of complex biological systems arise from the interactions among their parts. This new field requires a fusion of concepts from many disciplines, including biology, computer science, applied mathematics, physics and engineering.
Systems Biology is about "quantitative, predictive and dynamical biology". The ultimate aim of "quantitative, predictive and dynamical biology" is a reliable computational model of the cell, and a "Integrative Systems Physiology" model of the organism. It has a tremendous economic potential for pharmaceutical, and biotech industry. And in the case of the neuronal cell it also has a tremendous economic potential for computer companies.
Perhaps the most excitement about systems biology lies in the area of predictive, preventive and personalized medicine. Predictive, preventive and personalized medicine has the potential to transform medicine by decreasing morbidity and mortality due to chronic diseases such as cancer, Parkinson’s and diabetes.
Also in "Systems Biology" it is very important discovering the "DESIGN PRINCIPLES" (quantitative laws that govern the behavior of biological systems) which are common in physics and engineering, but so far have eluded biology. If we discover the "Design Principles" we will be able to design biological systems having desired properties (of that SYNTHETIC BIOLOGY consists).
What is Synthetic Biology?
Synthetic biology is the engineering of biology: the synthesis of complex, biologically based (or inspired) systems which display functions that do not exist in nature. This engineering perspective may be applied at all levels of the hierarchy of biological structures –from individual molecules to whole cells, tissues and organisms. In essence, synthetic biology will enable the design of 'biological systems' in a rational and systematic way.
This distinctive new approach promises solutions to some of today's most pressing and difficult problems in environmental protection, human health and energy production. It also provides an alternative perspective from which to consider, analyze and ultimately understand our living world.
Some useful mathematical tools in Systems Biology are Control Theory, Complex Adaptive Systems Theory, Computational Intelligence, Complex Networks Theory, Dynamical Systems theory, Nonlinear Dynamics, Process Algebra, and Stochastic Processes. But also is very important to develop new experimental techniques to validate the theoretical analysis.
Some key words are: Systems Biology, Network Biology, Control Biology, Genomic Cybernetics, Computational and Theoretical Bioengineering, Synthetic Biology, Computational Biology.
Interesting Videos:
The Music of Life: A new view on Nature and Nurture
Mathematical Modeling of Cell Signalling Pathways
SOME INTERESTING QUOTES:
" We are interested in how biological molecules communicate with each other, and how this communication encodes the processing of information. How do biomolecules recognize one another, and how do their interactions transduce signals? How do molecules build up "modules" that act as "adaptors", "switches" and feedback-loops? How are modules wired together into the networks responsible for regulation and decision processes observed in biology? " Kortemme Lab (UCSF)
"Controlled gene expression using engineered in-vivo digital-logic circuits and intercellular communications enables programmed cell behavior that is complex, predictable and reliable." (Ron Weiss, PhD Thesis Statement, MIT)
"Life is a relationship among molecules and not a property of any molecule." Linus Pauling
"The aim of science is not things in themselves but the relations between things; outside these relations there is no reality knowable." Henri Poincare
"Evolution: an algorithm for engineering biological systems" Frances Arnold (CalTech)
"Understanding the organism as a complex system in which genomes work in cooperation." Tokyo University
"Understanding and Control of Life Function via Systems Biology." Keio University
"The unified theme of my research is Emergence and Evolution of Intelligence" H.Kitano"Systems Biology: Understanding of biological network behaviors, and in particular their dynamic aspects, which requires the utilization of mathematical modeling tightly linked to experiment." WTEC
"Systems Biology defines and analyses the inter-relationships of all of the elements in a functioning system in order to understand how the system works." Leroy Hood
The biological agenda of Systems Biology should subsequently be defined by the following two questions related to intra- and intercellular processes within a cell and in cell populations:
- How do the components within a cell interact, so as to bring about its structure and realise its functioning?
- How do cells interact, so as to develop and maintain higher levels of organization and function?
(Olaf Wolkenhauer and Mihajlo Mesarovic)
I'VE CREATED THE FOLLOWING GROUPS IN HI5 AND IN FACEBOOK:
QUANTITATIVE BIOLOGY: Systems Biology, Computational Biology, Bioinformatics and Synthetic Biology
QUANTITATIVE NEUROBIOLOGY: Neuronal Systems Biology, Computational Neurosciences, Neurophysics and Neuroinformatics
CYBERNETICS AND SYSTEMS SCIENCE
